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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950245.1_cds_XP_016490796.1_81182
CDS Infomation

[gene=LOC107810519] [db_xref=GeneID:107810519] [protein=protein TRANSPARENT TESTA 1-like] [protein_id=XP_016490796.1] [location=complement(join(12488..12916,13094..13480))] [gbkey=CDS]
Sequence

ATGGAACGCTTATATTTGGCTTCATCTTCTAGTGTTGAAAATCAGATTGAACCGTTTGAT
TTCTTCGCAGAAAAAACCCAAAATGCATTTGAATTCCTTAGCTTGTCTCAGCCATCTGAA
AAAGAAATTAGACTATCAAATGATCAAGAAAACCCTAATTCTTGCCATTGGCCTGACAAA
GAAGATGATGTGACTGTTGCGTTACACATTGGTCTACCAAATTTCAGCAAGGCCTCTACT
AAAATTCCAACTGGTCATAACAAAGGAGATGCAAATATAGCAGCCACCAATTATTGGATA
CCAACCCCTTCACAAATCTTGGTTGGCTTCACCCAGTTTTCATGTCATATTTGTCACAAA
ACTTTCAATCGGTACAATAATCTTCAGATGCATATGTGGGGCCATGGTTCGCAATATCGA
AAAGGACCAGAATCACTTAAGGGAACACAACCAAGAGCCATGTTAGGGATACCATGCTAC
TGTTGTGAAGAAGGGTGCAAGAACAACAAAAATCACCCAAGGGCTAAGCCACTGAAAGAT
TTTAGAACACTGCAAACACATTACAAGAGAAAGCACGGGACAAAGCGTTTTGCATGCAGG
AAATGTGGAAAGTGTTTGGCTGTGAAAGGGGACTGGAGAACGCACGAGAAAAACTGTGGG
AAACGTTGGCTTTGCATTTGTGGTTCGGATTTTAAGCACAAGAGGTCGTTAAAAGATCAT
ATTGCTTCGTTTGGTGAAGGTCACGGCCCTTGTCCTCCTAATTCTTTTGAAGGGGTTGAA
GTTCAGAGAGCTGGAACATATTCTGTTTTCGTTTAA

Peptide Sequence

PEP ID

XP_016490796.1
PEP Infomation

PREDICTED: protein TRANSPARENT TESTA 1-like [Nicotiana tabacum]
Sequence

MERLYLASSSSVENQIEPFDFFAEKTQNAFEFLSLSQPSEKEIRLSNDQENPNSCHWPDK
EDDVTVALHIGLPNFSKASTKIPTGHNKGDANIAATNYWIPTPSQILVGFTQFSCHICHK
TFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCEEGCKNNKNHPRAKPLKD
FRTLQTHYKRKHGTKRFACRKCGKCLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDH
IASFGEGHGPCPPNSFEGVEVQRAGTYSVFV

Transcript Sequence

Gene sequence data has not been registered.